Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 AC074338.1-201ENST00000416825 156 ntBASIC13.54□□□□□ -0.24
APOC1P02654 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 FAM86GP-201ENST00000448322 971 ntBASIC13.54□□□□□ -0.24
APOC1P02654 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.54□□□□□ -0.24
APOC1P02654 AL158211.3-201ENST00000607385 239 ntBASIC13.54□□□□□ -0.24
APOC1P02654 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.54□□□□□ -0.24
APOC1P02654 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
APOC1P02654 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
APOC1P02654 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.54□□□□□ -0.24
APOC1P02654 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
APOC1P02654 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 AC118758.2-201ENST00000614242 2813 ntBASIC13.53□□□□□ -0.24
APOC1P02654 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC1P02654 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
APOC1P02654 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC1P02654 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC1P02654 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC1P02654 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC1P02654 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 AC010336.2-201ENST00000564226 506 ntBASIC13.53□□□□□ -0.24
APOC1P02654 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.53□□□□□ -0.24
APOC1P02654 AL691403.2-201ENST00000618460 490 ntBASIC13.53□□□□□ -0.24
APOC1P02654 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
APOC1P02654 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.53□□□□□ -0.24
APOC1P02654 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.53□□□□□ -0.24
APOC1P02654 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.53□□□□□ -0.24
APOC1P02654 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOC1P02654 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms