Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CD4P01730 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.67■□□□□ 0.26
CD4P01730 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 FKBP4P6-201ENST00000457486 1332 ntBASIC16.67■□□□□ 0.26
CD4P01730 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CD4P01730 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.66■□□□□ 0.26
CD4P01730 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CD4P01730 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CD4P01730 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.66■□□□□ 0.26
CD4P01730 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.66■□□□□ 0.26
CD4P01730 PDIA3P2-201ENST00000428073 158 ntBASIC16.66■□□□□ 0.26
CD4P01730 CEP164P1-201ENST00000455142 418 ntBASIC16.66■□□□□ 0.26
CD4P01730 AC104784.1-201ENST00000473096 294 ntBASIC16.66■□□□□ 0.26
CD4P01730 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.66■□□□□ 0.26
CD4P01730 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.66■□□□□ 0.26
CD4P01730 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.66■□□□□ 0.26
CD4P01730 AL160314.3-201ENST00000556041 767 ntBASIC16.66■□□□□ 0.26
CD4P01730 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.66■□□□□ 0.26
CD4P01730 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CD4P01730 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.66■□□□□ 0.26
CD4P01730 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.66■□□□□ 0.26
CD4P01730 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CD4P01730 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CD4P01730 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CD4P01730 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CD4P01730 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CD4P01730 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.65■□□□□ 0.26
CD4P01730 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CD4P01730 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.65■□□□□ 0.26
CD4P01730 RN7SKP175-201ENST00000408472 289 ntBASIC16.65■□□□□ 0.26
CD4P01730 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.65■□□□□ 0.26
CD4P01730 AL353637.1-201ENST00000451571 732 ntBASIC16.65■□□□□ 0.26
CD4P01730 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.65■□□□□ 0.26
CD4P01730 SNORD3B-2-202ENST00000571722 791 ntBASIC16.65■□□□□ 0.26
CD4P01730 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.65■□□□□ 0.26
CD4P01730 AL136301.1-201ENST00000615830 422 ntBASIC16.65■□□□□ 0.26
CD4P01730 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.65■□□□□ 0.26
CD4P01730 AL136295.7-201ENST00000619226 1200 ntBASIC16.65■□□□□ 0.26
CD4P01730 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.65■□□□□ 0.26
CD4P01730 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.65■□□□□ 0.26
CD4P01730 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CD4P01730 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.65■□□□□ 0.26
CD4P01730 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CD4P01730 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CD4P01730 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CD4P01730 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CD4P01730 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD4P01730 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD4P01730 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.64■□□□□ 0.25
CD4P01730 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD4P01730 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CD4P01730 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD4P01730 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD4P01730 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CD4P01730 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.64■□□□□ 0.25
CD4P01730 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CD4P01730 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms