Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 IL9RP3-201ENST00000442856 1674 ntBASIC17.02■□□□□ 0.32
ALDH1A1P00352 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALDH1A1P00352 DGAT2L7P-201ENST00000602462 744 ntBASIC17.02■□□□□ 0.32
ALDH1A1P00352 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.02■□□□□ 0.32
ALDH1A1P00352 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
ALDH1A1P00352 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC17.02■□□□□ 0.31
ALDH1A1P00352 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.31
ALDH1A1P00352 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ALDH1A1P00352 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALDH1A1P00352 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALDH1A1P00352 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ALDH1A1P00352 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ALDH1A1P00352 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALDH1A1P00352 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.02■□□□□ 0.31
ALDH1A1P00352 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.02■□□□□ 0.31
ALDH1A1P00352 MTHFR-217ENST00000641820 1569 ntBASIC17.02■□□□□ 0.31
ALDH1A1P00352 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ALDH1A1P00352 FLJ38576-201ENST00000623820 2459 ntBASIC17.02■□□□□ 0.31
ALDH1A1P00352 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 AC018629.1-201ENST00000623381 1736 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 DPY19L2P5-201ENST00000456300 331 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 AC026410.1-201ENST00000507366 1101 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 AC138701.2-201ENST00000553634 226 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.01■□□□□ 0.31
ALDH1A1P00352 AL451007.2-201ENST00000632004 563 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 FAM90A21P-201ENST00000510875 1396 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 FAM90A15P-201ENST00000514465 1395 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 FAM90A6P-201ENST00000515148 1394 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 FAM90A16P-201ENST00000526662 1395 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 FAM90A9P-201ENST00000527940 1395 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 FAM90A5P-201ENST00000528738 1395 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 FAM90A14P-201ENST00000530386 1395 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 FAM90A13P-201ENST00000534703 1395 ntBASIC17.01■□□□□ 0.31
ALDH1A1P00352 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALDH1A1P00352 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 LINC02447-202ENST00000501888 2146 ntBASIC17■□□□□ 0.31
ALDH1A1P00352 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
ALDH1A1P00352 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17■□□□□ 0.31
ALDH1A1P00352 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ALDH1A1P00352 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms