Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC21.54■■□□□ 1.04
POLR1AO95602 FAM45BP-202ENST00000592932 1624 ntBASIC21.54■■□□□ 1.04
POLR1AO95602 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 AC239868.1-201ENST00000369385 493 ntBASIC21.54■■□□□ 1.04
POLR1AO95602 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 AL583805.1-201ENST00000391389 531 ntBASIC21.54■■□□□ 1.04
POLR1AO95602 POU5F1P2-201ENST00000521750 823 ntBASIC21.54■■□□□ 1.04
POLR1AO95602 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
POLR1AO95602 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR1AO95602 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
POLR1AO95602 AC027237.1-201ENST00000560942 655 ntBASIC21.54■■□□□ 1.04
POLR1AO95602 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC21.54■■□□□ 1.04
POLR1AO95602 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
POLR1AO95602 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC21.54■■□□□ 1.04
POLR1AO95602 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 AC008741.2-201ENST00000612792 3115 ntBASIC21.54■■□□□ 1.04
POLR1AO95602 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
POLR1AO95602 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
POLR1AO95602 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
POLR1AO95602 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
POLR1AO95602 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1AO95602 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR1AO95602 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
POLR1AO95602 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC21.53■■□□□ 1.04
POLR1AO95602 AK6-201ENST00000380818 1183 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR1AO95602 KRT18P36-201ENST00000411618 1276 ntBASIC21.53■■□□□ 1.04
POLR1AO95602 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC21.53■■□□□ 1.04
POLR1AO95602 AL627422.1-201ENST00000434104 580 ntBASIC21.53■■□□□ 1.04
POLR1AO95602 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR1AO95602 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR1AO95602 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC21.53■■□□□ 1.04
POLR1AO95602 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR1AO95602 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
POLR1AO95602 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
POLR1AO95602 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR1AO95602 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 FKBP4P6-201ENST00000457486 1332 ntBASIC21.53■■□□□ 1.04
POLR1AO95602 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC21.53■■□□□ 1.04
POLR1AO95602 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
POLR1AO95602 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC21.53■■□□□ 1.04
POLR1AO95602 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1AO95602 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1AO95602 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR1AO95602 KLF2P1-201ENST00000447438 1042 ntBASIC21.52■■□□□ 1.04
POLR1AO95602 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1AO95602 DUX4L46-201ENST00000566845 751 ntBASIC21.52■■□□□ 1.04
POLR1AO95602 PHBP15-201ENST00000574228 665 ntBASIC21.52■■□□□ 1.04
POLR1AO95602 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
POLR1AO95602 AC244250.3-201ENST00000620749 366 ntBASIC21.52■■□□□ 1.04
POLR1AO95602 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1AO95602 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1AO95602 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC21.52■■□□□ 1.04
POLR1AO95602 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
POLR1AO95602 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
POLR1AO95602 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC21.52■■□□□ 1.04
POLR1AO95602 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.52■■□□□ 1.03
POLR1AO95602 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
POLR1AO95602 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
POLR1AO95602 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC21.52■■□□□ 1.03
POLR1AO95602 NCR3-202ENST00000376071 541 ntTSL 5 BASIC21.52■■□□□ 1.03
POLR1AO95602 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
POLR1AO95602 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC21.52■■□□□ 1.03
POLR1AO95602 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
POLR1AO95602 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
POLR1AO95602 AC084781.1-201ENST00000613737 656 ntBASIC21.52■■□□□ 1.03
POLR1AO95602 ETV2-207ENST00000619399 994 ntTSL 5 BASIC21.52■■□□□ 1.03
POLR1AO95602 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
POLR1AO95602 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC21.52■■□□□ 1.03
POLR1AO95602 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
POLR1AO95602 PCDHGB8P-201ENST00000502926 1973 ntBASIC21.52■■□□□ 1.03
POLR1AO95602 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
POLR1AO95602 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
POLR1AO95602 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1AO95602 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1AO95602 AC006058.4-201ENST00000624016 1670 ntBASIC21.51■■□□□ 1.03
POLR1AO95602 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC21.51■■□□□ 1.03
POLR1AO95602 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1AO95602 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC21.51■■□□□ 1.03
POLR1AO95602 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1AO95602 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1AO95602 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1AO95602 MBP-202ENST00000355994 2772 ntTSL 5 BASIC21.51■■□□□ 1.03
POLR1AO95602 TCAF2P1-201ENST00000291129 2421 ntBASIC21.51■■□□□ 1.03
POLR1AO95602 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
POLR1AO95602 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms