Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH8O95206 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.16■□□□□ 0.02
PCDH8O95206 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDH8O95206 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDH8O95206 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDH8O95206 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDH8O95206 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH8O95206 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDH8O95206 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 BTBD6P1-201ENST00000412176 1267 ntBASIC15.16■□□□□ 0.02
PCDH8O95206 GHSR-202ENST00000427970 912 ntBASIC15.16■□□□□ 0.02
PCDH8O95206 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDH8O95206 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCDH8O95206 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.16■□□□□ 0.02
PCDH8O95206 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDH8O95206 AL603764.1-201ENST00000636452 321 ntBASIC15.16■□□□□ 0.02
PCDH8O95206 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCDH8O95206 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.16■□□□□ 0.02
PCDH8O95206 MST1L-201ENST00000442552 2185 ntBASIC15.16■□□□□ 0.02
PCDH8O95206 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH8O95206 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDH8O95206 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.16■□□□□ 0.02
PCDH8O95206 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDH8O95206 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH8O95206 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDH8O95206 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDH8O95206 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCDH8O95206 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDH8O95206 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 AC012508.2-201ENST00000567613 1472 ntBASIC15.15■□□□□ 0.02
PCDH8O95206 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 AL596257.1-201ENST00000641463 2694 ntBASIC15.15■□□□□ 0.02
PCDH8O95206 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 AC136621.1-201ENST00000624017 2304 ntBASIC15.15■□□□□ 0.02
PCDH8O95206 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH8O95206 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH8O95206 COX5BP1-201ENST00000507622 393 ntBASIC15.15■□□□□ 0.02
PCDH8O95206 FAM86HP-204ENST00000513466 959 ntBASIC15.15■□□□□ 0.02
PCDH8O95206 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 AP006547.1-201ENST00000563435 692 ntBASIC15.15■□□□□ 0.02
PCDH8O95206 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH8O95206 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PCDH8O95206 AC243960.2-201ENST00000600996 747 ntBASIC15.15■□□□□ 0.02
PCDH8O95206 OR10B1P-201ENST00000601666 907 ntBASIC15.15■□□□□ 0.02
PCDH8O95206 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH8O95206 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDH8O95206 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDH8O95206 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH8O95206 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH8O95206 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDH8O95206 REXO1L4P-201ENST00000605109 1937 ntBASIC15.15■□□□□ 0.02
PCDH8O95206 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms