Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC6.57□□□□□ -1.36
USH2AO75445 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
USH2AO75445 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC6.57□□□□□ -1.36
USH2AO75445 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC6.57□□□□□ -1.36
USH2AO75445 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC6.57□□□□□ -1.36
USH2AO75445 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
USH2AO75445 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC6.57□□□□□ -1.36
USH2AO75445 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
USH2AO75445 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC6.57□□□□□ -1.36
USH2AO75445 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC6.57□□□□□ -1.36
USH2AO75445 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
USH2AO75445 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
USH2AO75445 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
USH2AO75445 HNRNPA1P27-201ENST00000412087 955 ntBASIC6.56□□□□□ -1.36
USH2AO75445 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
USH2AO75445 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC6.56□□□□□ -1.36
USH2AO75445 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC6.56□□□□□ -1.36
USH2AO75445 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
USH2AO75445 PDLIM1P1-201ENST00000604187 969 ntBASIC6.56□□□□□ -1.36
USH2AO75445 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 AL590440.2-201ENST00000641973 1595 ntBASIC6.56□□□□□ -1.36
USH2AO75445 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
USH2AO75445 FAM86FP-201ENST00000338711 969 ntBASIC6.56□□□□□ -1.36
USH2AO75445 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC6.56□□□□□ -1.36
USH2AO75445 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 DPY19L2P4-201ENST00000479881 442 ntBASIC6.56□□□□□ -1.36
USH2AO75445 DLG4-206ENST00000485100 1004 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 CASP3-205ENST00000517513 964 ntTSL 5 BASIC6.56□□□□□ -1.36
USH2AO75445 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC6.56□□□□□ -1.36
USH2AO75445 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC6.56□□□□□ -1.36
USH2AO75445 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC6.56□□□□□ -1.36
USH2AO75445 AC115618.3-201ENST00000623114 425 ntBASIC6.56□□□□□ -1.36
USH2AO75445 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC6.56□□□□□ -1.36
USH2AO75445 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 AC138761.6-201ENST00000583997 1423 ntBASIC6.56□□□□□ -1.36
USH2AO75445 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC6.56□□□□□ -1.36
USH2AO75445 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 KRT18P44-201ENST00000416086 1285 ntBASIC6.56□□□□□ -1.36
USH2AO75445 AC026884.1-201ENST00000418296 457 ntBASIC6.56□□□□□ -1.36
USH2AO75445 GNG10P1-201ENST00000452289 199 ntBASIC6.56□□□□□ -1.36
USH2AO75445 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
USH2AO75445 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
USH2AO75445 AC026412.1-206ENST00000502273 206 ntBASIC6.56□□□□□ -1.36
USH2AO75445 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC6.56□□□□□ -1.36
USH2AO75445 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms