Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
OPHN1O60890 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
OPHN1O60890 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
OPHN1O60890 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
OPHN1O60890 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
OPHN1O60890 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.95■□□□□ 0.14
OPHN1O60890 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.95■□□□□ 0.14
OPHN1O60890 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.95■□□□□ 0.14
OPHN1O60890 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.95■□□□□ 0.14
OPHN1O60890 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.95■□□□□ 0.14
OPHN1O60890 REXO1L6P-201ENST00000603433 1515 ntBASIC15.95■□□□□ 0.14
OPHN1O60890 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.95■□□□□ 0.14
OPHN1O60890 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
OPHN1O60890 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
OPHN1O60890 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
OPHN1O60890 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
OPHN1O60890 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
OPHN1O60890 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 TMEM14DP-201ENST00000422205 345 ntBASIC15.95■□□□□ 0.14
OPHN1O60890 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.95■□□□□ 0.14
OPHN1O60890 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.95■□□□□ 0.14
OPHN1O60890 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.95■□□□□ 0.14
OPHN1O60890 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 AC015910.1-201ENST00000579400 975 ntBASIC15.95■□□□□ 0.14
OPHN1O60890 AC084346.2-201ENST00000607097 949 ntBASIC15.95■□□□□ 0.14
OPHN1O60890 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.95■□□□□ 0.14
OPHN1O60890 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.95■□□□□ 0.14
OPHN1O60890 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.95■□□□□ 0.14
OPHN1O60890 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
OPHN1O60890 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.95■□□□□ 0.14
OPHN1O60890 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
OPHN1O60890 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.94■□□□□ 0.14
OPHN1O60890 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.94■□□□□ 0.14
OPHN1O60890 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.94■□□□□ 0.14
OPHN1O60890 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
OPHN1O60890 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 FAM86MP-201ENST00000340703 885 ntBASIC15.94■□□□□ 0.14
OPHN1O60890 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.94■□□□□ 0.14
OPHN1O60890 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.94■□□□□ 0.14
OPHN1O60890 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
OPHN1O60890 AL133267.1-201ENST00000398220 340 ntBASIC15.94■□□□□ 0.14
OPHN1O60890 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.94■□□□□ 0.14
OPHN1O60890 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
OPHN1O60890 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.94■□□□□ 0.14
OPHN1O60890 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.94■□□□□ 0.14
OPHN1O60890 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.94■□□□□ 0.14
OPHN1O60890 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
OPHN1O60890 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
OPHN1O60890 AC015936.2-201ENST00000593177 259 ntBASIC15.94■□□□□ 0.14
OPHN1O60890 AC074044.1-201ENST00000609673 707 ntBASIC15.94■□□□□ 0.14
OPHN1O60890 MIR6775-201ENST00000617557 69 ntBASIC15.94■□□□□ 0.14
OPHN1O60890 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.94■□□□□ 0.14
OPHN1O60890 AL109936.8-201ENST00000641772 604 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms