Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 AC007250.1-201ENST00000608934 338 ntBASIC15.86■□□□□ 0.13
SOX1O00570 AL118522.1-201ENST00000611368 560 ntBASIC15.86■□□□□ 0.13
SOX1O00570 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 AL138725.1-201ENST00000407347 1314 ntBASIC15.86■□□□□ 0.13
SOX1O00570 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SOX1O00570 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.86■□□□□ 0.13
SOX1O00570 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
SOX1O00570 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SOX1O00570 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 FAU-201ENST00000279259 461 ntTSL 2 BASIC15.85■□□□□ 0.13
SOX1O00570 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.85■□□□□ 0.13
SOX1O00570 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 AL512306.1-201ENST00000432698 848 ntBASIC15.85■□□□□ 0.13
SOX1O00570 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.85■□□□□ 0.13
SOX1O00570 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.85■□□□□ 0.13
SOX1O00570 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC15.85■□□□□ 0.13
SOX1O00570 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC15.85■□□□□ 0.13
SOX1O00570 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
SOX1O00570 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SOX1O00570 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 AC141586.5-201ENST00000624546 2050 ntBASIC15.85■□□□□ 0.13
SOX1O00570 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
SOX1O00570 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SOX1O00570 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.85■□□□□ 0.13
SOX1O00570 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SOX1O00570 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 AC139713.2-201ENST00000641328 2723 ntBASIC15.84■□□□□ 0.13
SOX1O00570 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.84■□□□□ 0.13
SOX1O00570 AL137077.2-201ENST00000635124 1608 ntBASIC15.84■□□□□ 0.13
SOX1O00570 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 RN7SKP230-201ENST00000365642 335 ntBASIC15.84■□□□□ 0.13
SOX1O00570 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.84■□□□□ 0.13
SOX1O00570 VENTXP4-201ENST00000449029 958 ntBASIC15.84■□□□□ 0.13
SOX1O00570 GNG10P1-201ENST00000452289 199 ntBASIC15.84■□□□□ 0.13
SOX1O00570 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC15.84■□□□□ 0.13
SOX1O00570 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.84■□□□□ 0.13
SOX1O00570 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.84■□□□□ 0.13
SOX1O00570 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.84■□□□□ 0.13
SOX1O00570 AC068831.5-201ENST00000557387 328 ntBASIC15.84■□□□□ 0.13
SOX1O00570 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC15.84■□□□□ 0.13
SOX1O00570 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 AC080013.5-201ENST00000607044 679 ntBASIC15.84■□□□□ 0.13
SOX1O00570 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SOX1O00570 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.84■□□□□ 0.13
SOX1O00570 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SOX1O00570 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.84■□□□□ 0.13
SOX1O00570 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms