Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
DDX39AO00148 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 AHCYP2-201ENST00000430630 1300 ntBASIC17.07■□□□□ 0.32
DDX39AO00148 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
DDX39AO00148 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.07■□□□□ 0.32
DDX39AO00148 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.07■□□□□ 0.32
DDX39AO00148 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.07■□□□□ 0.32
DDX39AO00148 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.07■□□□□ 0.32
DDX39AO00148 AL109954.1-202ENST00000564051 2148 ntBASIC17.07■□□□□ 0.32
DDX39AO00148 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
DDX39AO00148 AC006453.4-201ENST00000636949 1252 ntBASIC17.07■□□□□ 0.32
DDX39AO00148 AC008687.7-202ENST00000637404 953 ntBASIC17.07■□□□□ 0.32
DDX39AO00148 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
DDX39AO00148 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
DDX39AO00148 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
DDX39AO00148 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
DDX39AO00148 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.07■□□□□ 0.32
DDX39AO00148 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
DDX39AO00148 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
DDX39AO00148 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.06■□□□□ 0.32
DDX39AO00148 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DDX39AO00148 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX39AO00148 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX39AO00148 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX39AO00148 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX39AO00148 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
DDX39AO00148 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.06■□□□□ 0.32
DDX39AO00148 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
DDX39AO00148 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 AC245100.3-201ENST00000441281 285 ntBASIC17.06■□□□□ 0.32
DDX39AO00148 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.06■□□□□ 0.32
DDX39AO00148 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.06■□□□□ 0.32
DDX39AO00148 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.06■□□□□ 0.32
DDX39AO00148 MIR4741-201ENST00000579822 90 ntBASIC17.06■□□□□ 0.32
DDX39AO00148 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.06■□□□□ 0.32
DDX39AO00148 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
DDX39AO00148 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
DDX39AO00148 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.06■□□□□ 0.32
DDX39AO00148 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DDX39AO00148 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.06■□□□□ 0.32
DDX39AO00148 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.05■□□□□ 0.32
DDX39AO00148 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX39AO00148 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DDX39AO00148 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
DDX39AO00148 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 AC011270.2-201ENST00000624293 2550 ntBASIC17.05■□□□□ 0.32
DDX39AO00148 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX39AO00148 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.05■□□□□ 0.32
DDX39AO00148 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.05■□□□□ 0.32
DDX39AO00148 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
DDX39AO00148 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
DDX39AO00148 POM121L8P-201ENST00000417732 1281 ntBASIC17.05■□□□□ 0.32
DDX39AO00148 POM121L9P-203ENST00000441984 1285 ntBASIC17.05■□□□□ 0.32
DDX39AO00148 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DDX39AO00148 PFN2-215ENST00000497148 743 ntTSL 4 BASIC17.05■□□□□ 0.32
DDX39AO00148 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms