Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 LINC01230-201ENST00000625222 3017 ntBASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DDX49Q9Y6V7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 AL353779.1-201ENST00000434793 351 ntBASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 AC114501.2-201ENST00000439631 535 ntBASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 SRD5A3P1-201ENST00000603021 949 ntBASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 AC007431.3-201ENST00000623221 587 ntBASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 ZBED1P1-201ENST00000502364 1930 ntBASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DDX49Q9Y6V7 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 HIST3H2BA-201ENST00000436555 524 ntBASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 AL358472.5-202ENST00000641448 1267 ntBASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DDX49Q9Y6V7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DDX49Q9Y6V7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms