Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTDP1Q9Y5B0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 AC009090.5-201ENST00000624886 2285 ntBASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 AC079178.1-201ENST00000420915 656 ntBASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 AL591846.1-201ENST00000451736 433 ntBASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 PPY2P-201ENST00000582808 702 ntBASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 AC105250.1-201ENST00000509378 2057 ntBASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 REXO1L5P-201ENST00000622260 2098 ntBASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 PCDHA1-201ENST00000378133 2726 ntBASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTDP1Q9Y5B0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 RPSAP36-202ENST00000494591 1261 ntBASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 AC092850.2-201ENST00000623821 2697 ntBASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTDP1Q9Y5B0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 AC026691.1-201ENST00000602502 2017 ntBASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.52■□□□□ 0.4
CTDP1Q9Y5B0 DOC2GP-204ENST00000639052 2548 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms