Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 MIR574-201ENST00000385209 96 ntBASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 AL353705.2-201ENST00000428243 662 ntBASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 POLD2P1-201ENST00000511220 997 ntBASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RIMS3Q9UJD0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 AC005237.2-201ENST00000434368 219 ntBASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 ALG1L5P-201ENST00000482043 771 ntBASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 ALG1L8P-201ENST00000533887 760 ntBASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 AC022145.2-201ENST00000598203 171 ntBASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 AC105339.1-204ENST00000636249 355 ntBASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.42□□□□□ -0.1
RIMS3Q9UJD0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 ELL2P1-201ENST00000413990 1906 ntBASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.41□□□□□ -0.1
RIMS3Q9UJD0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms