Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 AL136172.1-201ENST00000598590 1394 ntBASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NPC1L1Q9UHC9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
NPC1L1Q9UHC9 F10-203ENST00000409306 1450 ntTSL 3 BASIC20.14■□□□□ 0.82
NPC1L1Q9UHC9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 AK6-201ENST00000380818 1183 ntTSL 2 BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 AL591846.1-201ENST00000451736 433 ntBASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 CICP12-201ENST00000455801 843 ntBASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 DUX4L46-201ENST00000566845 751 ntBASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 AL136301.1-201ENST00000615830 422 ntBASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 AL162426.1-201ENST00000624141 743 ntBASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NPC1L1Q9UHC9 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AL096828.3-201ENST00000615354 462 ntBASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPC1L1Q9UHC9 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 USP35-204ENST00000530267 2419 ntTSL 2 BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPC1L1Q9UHC9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPC1L1Q9UHC9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms