Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
HDAC6Q9UBN7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HDAC6Q9UBN7 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HDAC6Q9UBN7 KRT8P35-201ENST00000483942 1338 ntBASIC17.21■□□□□ 0.34
HDAC6Q9UBN7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HDAC6Q9UBN7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 MIR1247-201ENST00000408206 136 ntBASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 FAM86HP-204ENST00000513466 959 ntBASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 C2orf69P2-201ENST00000562032 1123 ntBASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 AC138951.2-201ENST00000623455 1161 ntBASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 AC105250.1-201ENST00000509378 2057 ntBASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HDAC6Q9UBN7 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 AC132938.4-201ENST00000623835 848 ntBASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.19■□□□□ 0.34
HDAC6Q9UBN7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HDAC6Q9UBN7 AC009090.5-201ENST00000624886 2285 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms