Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 AC132938.2-201ENST00000579188 680 ntBASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 AL591163.1-201ENST00000641757 987 ntBASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
KCMF1Q9P0J7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 AL512384.1-201ENST00000406683 331 ntBASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 RN7SL837P-201ENST00000463010 287 ntBASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 AP005019.2-201ENST00000615104 511 ntBASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KCMF1Q9P0J7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
KCMF1Q9P0J7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms