Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 AC036164.1-201ENST00000570544 333 ntBASIC13.24□□□□□ -0.29
TREM2Q9NZC2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TREM2Q9NZC2 AL121723.1-201ENST00000445194 1519 ntBASIC13.23□□□□□ -0.29
TREM2Q9NZC2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 RPL5P21-201ENST00000404620 815 ntBASIC13.23□□□□□ -0.29
TREM2Q9NZC2 U91328.1-201ENST00000437528 223 ntBASIC13.23□□□□□ -0.29
TREM2Q9NZC2 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 GPR53P-205ENST00000457298 1084 ntBASIC13.23□□□□□ -0.29
TREM2Q9NZC2 FAM86LP-201ENST00000478302 853 ntBASIC13.23□□□□□ -0.29
TREM2Q9NZC2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TREM2Q9NZC2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TREM2Q9NZC2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms