Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 POM121L8P-201ENST00000417732 1281 ntBASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 POM121L9P-203ENST00000441984 1285 ntBASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 AC011495.1-201ENST00000498085 584 ntBASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 FAM45BP-202ENST00000592932 1624 ntBASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 LINC02084-201ENST00000606069 1096 ntBASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.83■□□□□ 0.28
BLOC1S4Q9NUP1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 AC023908.3-201ENST00000564211 3047 ntBASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 AC092933.1-201ENST00000393644 945 ntBASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 FO681548.1-201ENST00000455617 1132 ntBASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 SLC25A47P1-201ENST00000531577 414 ntBASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
BLOC1S4Q9NUP1 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
BLOC1S4Q9NUP1 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms