Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 RN7SL48P-201ENST00000579283 293 ntBASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ECHDC1Q9NTX5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ECHDC1Q9NTX5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.46■□□□□ 0.54
ECHDC1Q9NTX5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 AC018442.1-201ENST00000421439 2061 ntBASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 FO681548.1-201ENST00000455617 1132 ntBASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 AC132938.4-201ENST00000623835 848 ntBASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ECHDC1Q9NTX5 CICP14-201ENST00000629111 2732 ntBASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 FTH1P14-201ENST00000482930 551 ntBASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 ETV2-208ENST00000621247 941 ntTSL 5 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 ENPP7P14-201ENST00000621765 1040 ntBASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ECHDC1Q9NTX5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms