Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 AP002472.1-201ENST00000577490 586 ntBASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 SLC25A6P4-201ENST00000586535 553 ntBASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 AC126365.1-201ENST00000578585 1514 ntBASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 AOC4P-203ENST00000566825 2289 ntBASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 AKAP8P1-201ENST00000434743 1349 ntBASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
C12orf4Q9NQ89 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 RPS8P6-201ENST00000426177 609 ntBASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 AC034105.1-201ENST00000563488 319 ntBASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 MIR4313-201ENST00000580760 101 ntBASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 AC099522.2-201ENST00000607001 744 ntBASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.36□□□□□ -0.27
C12orf4Q9NQ89 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 AC092117.1-201ENST00000621230 3250 ntBASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 KRT8P44-201ENST00000441609 1350 ntBASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 NUTM2HP-201ENST00000442076 2498 ntBASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
C12orf4Q9NQ89 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms