Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 AC104982.3-201ENST00000581995 514 ntBASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 TMBIM7P-203ENST00000641617 1718 ntBASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF3Q9HD45 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 AC068587.6-202ENST00000641839 5619 ntBASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 AP006547.1-201ENST00000563435 692 ntBASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 PRSS30P-206ENST00000641773 873 ntBASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF3Q9HD45 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 AC006486.2-201ENST00000624246 2199 ntBASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF3Q9HD45 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 AL096828.3-201ENST00000615354 462 ntBASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 AC244452.3-201ENST00000636814 210 ntBASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 LRRC59-203ENST00000576448 1531 ntBASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF3Q9HD45 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms