Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 APP-205ENST00000358918 2366 ntTSL 5 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SND1-IT1Q9HBX3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 CICP17-201ENST00000418553 2377 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AC152010.1-201ENST00000415779 2006 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AL031284.1-201ENST00000419297 478 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 KRT19P2-202ENST00000557173 1012 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AC011467.4-201ENST00000594891 528 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AC068137.2-201ENST00000605408 478 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AL031008.1-201ENST00000619963 541 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 AC116407.3-201ENST00000623905 1129 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 CYP4F24P-201ENST00000586049 1580 ntBASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.25□□□□□ -0.77
SND1-IT1Q9HBX3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms