Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEBOXQ9HB31 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEBOXQ9HB31 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEBOXQ9HB31 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEBOXQ9HB31 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13□□□□□ -0.33
SEBOXQ9HB31 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 AC073869.1-201ENST00000415574 2762 ntBASIC13□□□□□ -0.33
SEBOXQ9HB31 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 AC006504.5-208ENST00000588784 2401 ntBASIC13□□□□□ -0.33
SEBOXQ9HB31 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13□□□□□ -0.33
SEBOXQ9HB31 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 BASP1P1-201ENST00000430708 665 ntBASIC13□□□□□ -0.33
SEBOXQ9HB31 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13□□□□□ -0.33
SEBOXQ9HB31 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13□□□□□ -0.33
SEBOXQ9HB31 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13□□□□□ -0.33
SEBOXQ9HB31 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13□□□□□ -0.33
SEBOXQ9HB31 RRP7BP-205ENST00000566851 833 ntBASIC13□□□□□ -0.33
SEBOXQ9HB31 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13□□□□□ -0.33
SEBOXQ9HB31 SRD5A3P1-201ENST00000603021 949 ntBASIC13□□□□□ -0.33
SEBOXQ9HB31 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 AC099521.3-201ENST00000624251 2938 ntBASIC13□□□□□ -0.33
SEBOXQ9HB31 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
SEBOXQ9HB31 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SEBOXQ9HB31 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SEBOXQ9HB31 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.99□□□□□ -0.33
SEBOXQ9HB31 GAPDHP40-201ENST00000505218 1006 ntBASIC12.99□□□□□ -0.33
SEBOXQ9HB31 IGHV3-42-201ENST00000520410 361 ntBASIC12.99□□□□□ -0.33
SEBOXQ9HB31 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms