Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 AC073347.1-201ENST00000421633 2643 ntBASIC16.32■□□□□ 0.2
NXF3Q9H4D5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.32■□□□□ 0.2
NXF3Q9H4D5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 AC023090.2-201ENST00000625182 2110 ntBASIC16.31■□□□□ 0.2
NXF3Q9H4D5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 AL133338.1-201ENST00000565695 1517 ntBASIC16.31■□□□□ 0.2
NXF3Q9H4D5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 CICP6-201ENST00000457191 2729 ntBASIC16.31■□□□□ 0.2
NXF3Q9H4D5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 RN7SKP230-201ENST00000365642 335 ntBASIC16.31■□□□□ 0.2
NXF3Q9H4D5 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 AP001258.2-201ENST00000529891 490 ntBASIC16.31■□□□□ 0.2
NXF3Q9H4D5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NXF3Q9H4D5 AC091951.1-201ENST00000512854 2465 ntBASIC16.3■□□□□ 0.2
NXF3Q9H4D5 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 KRT8P13-201ENST00000463294 1010 ntBASIC16.3■□□□□ 0.2
NXF3Q9H4D5 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 AC005730.2-201ENST00000564549 1184 ntBASIC16.3■□□□□ 0.2
NXF3Q9H4D5 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 AL358472.3-201ENST00000608147 415 ntBASIC16.3■□□□□ 0.2
NXF3Q9H4D5 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
NXF3Q9H4D5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 WASH3P-207ENST00000560956 1394 ntBASIC16.29■□□□□ 0.2
NXF3Q9H4D5 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.29■□□□□ 0.2
NXF3Q9H4D5 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms