Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 ELP5-212ENST00000574255 671 ntTSL 2 BASIC19.05■□□□□ 0.64
SHANK3Q9BYB0 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC19.05■□□□□ 0.64
SHANK3Q9BYB0 AC138466.5-201ENST00000624002 808 ntBASIC19.05■□□□□ 0.64
SHANK3Q9BYB0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHANK3Q9BYB0 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHANK3Q9BYB0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SHANK3Q9BYB0 AP002353.1-201ENST00000528257 1599 ntBASIC19.05■□□□□ 0.64
SHANK3Q9BYB0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 AC136621.1-201ENST00000624017 2304 ntBASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 GUSBP10-201ENST00000417412 665 ntBASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHANK3Q9BYB0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 AC139712.1-201ENST00000378256 1875 ntBASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 RN7SKP109-201ENST00000410592 316 ntBASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 AC138701.2-201ENST00000553634 226 ntBASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 KRT8P1-201ENST00000557533 1207 ntBASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 AC124068.2-201ENST00000569473 1109 ntBASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 LTB4R2-202ENST00000528054 3092 ntBASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 RN7SL396P-201ENST00000471086 295 ntBASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHANK3Q9BYB0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 MRPL37P1-201ENST00000592451 1337 ntBASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 GSN-206ENST00000394353 2311 ntTSL 2 BASIC19.02■□□□□ 0.64
SHANK3Q9BYB0 HLA-DMA-203ENST00000395305 777 ntBASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 AL354861.1-201ENST00000445213 355 ntBASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHANK3Q9BYB0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK3Q9BYB0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.01■□□□□ 0.63
SHANK3Q9BYB0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SHANK3Q9BYB0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK3Q9BYB0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHANK3Q9BYB0 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.01■□□□□ 0.63
SHANK3Q9BYB0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms