Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.91□□□□□ -0.18
RSPO3Q9BXY4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RSPO3Q9BXY4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RSPO3Q9BXY4 AC055811.4-201ENST00000624039 1754 ntBASIC13.91□□□□□ -0.18
RSPO3Q9BXY4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RSPO3Q9BXY4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.91□□□□□ -0.18
RSPO3Q9BXY4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.91□□□□□ -0.18
RSPO3Q9BXY4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.91□□□□□ -0.18
RSPO3Q9BXY4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 KRT8P22-201ENST00000562317 1415 ntBASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 HMGN1P19-201ENST00000436976 333 ntBASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 AC099568.2-201ENST00000609194 695 ntBASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RSPO3Q9BXY4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RSPO3Q9BXY4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RSPO3Q9BXY4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RSPO3Q9BXY4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RSPO3Q9BXY4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 SERBP1P5-201ENST00000510079 1181 ntBASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AC092552.1-201ENST00000547243 906 ntBASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 RRP7BP-205ENST00000566851 833 ntBASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 AL355385.1-201ENST00000606123 409 ntBASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
RSPO3Q9BXY4 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms