Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SSBP3Q9BWW4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 AC009090.5-201ENST00000624886 2285 ntBASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 PDIA3P1-201ENST00000471856 1510 ntBASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 KRT8P35-201ENST00000483942 1338 ntBASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 AL645937.2-201ENST00000396808 931 ntBASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 AC016694.1-201ENST00000434179 700 ntBASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 KLF2P4-201ENST00000451959 1225 ntBASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 AC106760.1-201ENST00000508690 800 ntBASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SSBP3Q9BWW4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 AC093525.8-201ENST00000624099 1342 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 PCDHA3-202ENST00000532566 4594 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 AC090616.6-203ENST00000579186 1945 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 AC092933.1-201ENST00000393644 945 ntBASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
SSBP3Q9BWW4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms