Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
EYA3Q99504 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.29■□□□□ 0.52
EYA3Q99504 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.29■□□□□ 0.52
EYA3Q99504 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
EYA3Q99504 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.29■□□□□ 0.52
EYA3Q99504 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.29■□□□□ 0.52
EYA3Q99504 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 HLA-J-204ENST00000495278 958 ntBASIC18.29■□□□□ 0.52
EYA3Q99504 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 AC009779.1-201ENST00000551138 283 ntBASIC18.29■□□□□ 0.52
EYA3Q99504 MIR5572-201ENST00000583188 137 ntBASIC18.29■□□□□ 0.52
EYA3Q99504 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
EYA3Q99504 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 REXO1L4P-201ENST00000605109 1937 ntBASIC18.29■□□□□ 0.52
EYA3Q99504 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.29■□□□□ 0.52
EYA3Q99504 AMT-239ENST00000636865 1914 ntTSL 5 BASIC18.29■□□□□ 0.52
EYA3Q99504 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
EYA3Q99504 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.29■□□□□ 0.52
EYA3Q99504 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
EYA3Q99504 AC020910.5-201ENST00000623668 1865 ntBASIC18.29■□□□□ 0.52
EYA3Q99504 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.28■□□□□ 0.52
EYA3Q99504 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 CICP11-201ENST00000434745 2827 ntBASIC18.28■□□□□ 0.52
EYA3Q99504 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
EYA3Q99504 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.28■□□□□ 0.52
EYA3Q99504 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 RN7SKP230-201ENST00000365642 335 ntBASIC18.28■□□□□ 0.52
EYA3Q99504 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
EYA3Q99504 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.28■□□□□ 0.52
EYA3Q99504 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 PDIA3P2-201ENST00000428073 158 ntBASIC18.28■□□□□ 0.52
EYA3Q99504 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.28■□□□□ 0.52
EYA3Q99504 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.28■□□□□ 0.52
EYA3Q99504 AC103988.2-201ENST00000561804 725 ntBASIC18.28■□□□□ 0.52
EYA3Q99504 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.28■□□□□ 0.52
EYA3Q99504 AC008805.1-201ENST00000590892 364 ntBASIC18.28■□□□□ 0.52
EYA3Q99504 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC18.28■□□□□ 0.52
EYA3Q99504 AC012044.1-201ENST00000603431 297 ntBASIC18.28■□□□□ 0.52
EYA3Q99504 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
EYA3Q99504 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.28■□□□□ 0.52
EYA3Q99504 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.28■□□□□ 0.52
EYA3Q99504 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
EYA3Q99504 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
EYA3Q99504 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
EYA3Q99504 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
EYA3Q99504 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
EYA3Q99504 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
EYA3Q99504 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
EYA3Q99504 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.27■□□□□ 0.52
EYA3Q99504 AL138725.1-201ENST00000407347 1314 ntBASIC18.27■□□□□ 0.52
EYA3Q99504 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.27■□□□□ 0.52
EYA3Q99504 AL008718.2-201ENST00000609206 1313 ntBASIC18.27■□□□□ 0.52
EYA3Q99504 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
EYA3Q99504 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.27■□□□□ 0.52
EYA3Q99504 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.27■□□□□ 0.52
EYA3Q99504 AC008267.1-201ENST00000474858 1069 ntBASIC18.27■□□□□ 0.52
EYA3Q99504 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.27■□□□□ 0.52
EYA3Q99504 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC18.27■□□□□ 0.52
EYA3Q99504 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
EYA3Q99504 RTN3P1-201ENST00000536295 711 ntBASIC18.27■□□□□ 0.52
EYA3Q99504 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.27■□□□□ 0.52
EYA3Q99504 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC18.27■□□□□ 0.52
EYA3Q99504 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
EYA3Q99504 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
EYA3Q99504 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms