Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC18.3■□□□□ 0.52
CRAMP1Q96RY5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRAMP1Q96RY5 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CRAMP1Q96RY5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CRAMP1Q96RY5 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRAMP1Q96RY5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRAMP1Q96RY5 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CRAMP1Q96RY5 CAP2P1-201ENST00000557743 1390 ntBASIC18.3■□□□□ 0.52
CRAMP1Q96RY5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 AP000845.1-201ENST00000581677 2131 ntBASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 AC074138.1-201ENST00000611182 1303 ntBASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 RN7SL8P-201ENST00000461771 266 ntBASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 PHBP15-201ENST00000574228 665 ntBASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 AC092850.2-201ENST00000623821 2697 ntBASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CRAMP1Q96RY5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 AL355334.1-201ENST00000417713 215 ntBASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 RPL8P2-201ENST00000430538 502 ntBASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 AL031713.1-201ENST00000564813 661 ntBASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 AC242376.2-201ENST00000619355 883 ntBASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CRAMP1Q96RY5 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 PRAL-201ENST00000624952 3286 ntBASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CRAMP1Q96RY5 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms