Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC4.43□□□□□ -1.7
HMCN1Q96RW7 AC006372.4-201ENST00000624122 1543 ntBASIC4.43□□□□□ -1.7
HMCN1Q96RW7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC008267.3-201ENST00000448776 712 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 DUX4L50-201ENST00000455245 715 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 RPS23-207ENST00000511844 530 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 BATF-202ENST00000555504 361 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC012572.1-201ENST00000581634 397 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 OR5G5P-204ENST00000627642 621 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SRSF9P1-201ENST00000399149 530 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CCND3P1-201ENST00000438347 580 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 RN7SL128P-201ENST00000467883 305 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC233724.9-201ENST00000511694 407 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 PRDX2P3-201ENST00000515779 586 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CNOT8-217ENST00000521450 1158 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CETN3-205ENST00000522842 664 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CIPC-206ENST00000555611 599 ntTSL 4 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC020909.3-201ENST00000598194 375 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 DANCR-205ENST00000623036 748 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC026336.4-201ENST00000624565 1050 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AR-207ENST00000612010 3896 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 GAPDHP65-201ENST00000425487 1006 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 HNRNPA3P6-201ENST00000472163 1006 ntBASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 LINC00929-202ENST00000556159 1169 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 ZNF223-202ENST00000585552 541 ntTSL 4 BASIC4.42□□□□□ -1.7
HMCN1Q96RW7 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms