Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.96□□□□□ -0.18
SNX18Q96RF0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SNX18Q96RF0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNX18Q96RF0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SNX18Q96RF0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.96□□□□□ -0.18
SNX18Q96RF0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.95□□□□□ -0.18
SNX18Q96RF0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AC097376.2-205ENST00000610159 5334 ntBASIC13.95□□□□□ -0.18
SNX18Q96RF0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AC118758.2-201ENST00000614242 2813 ntBASIC13.95□□□□□ -0.18
SNX18Q96RF0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 MIR943-201ENST00000401286 94 ntBASIC13.95□□□□□ -0.18
SNX18Q96RF0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 GHSR-202ENST00000427970 912 ntBASIC13.95□□□□□ -0.18
SNX18Q96RF0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 RNA5SP421-201ENST00000516864 134 ntBASIC13.95□□□□□ -0.18
SNX18Q96RF0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AC069262.1-201ENST00000539058 672 ntBASIC13.95□□□□□ -0.18
SNX18Q96RF0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 AC015911.4-201ENST00000588022 1070 ntBASIC13.95□□□□□ -0.18
SNX18Q96RF0 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 ZBED1P1-201ENST00000502364 1930 ntBASIC13.95□□□□□ -0.18
SNX18Q96RF0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SNX18Q96RF0 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.95□□□□□ -0.18
SNX18Q96RF0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 LINC01230-201ENST00000625222 3017 ntBASIC13.94□□□□□ -0.18
SNX18Q96RF0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SNX18Q96RF0 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SNX18Q96RF0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms