Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.8■□□□□ 0.44
TRIM47Q96LD4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM47Q96LD4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM47Q96LD4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.8■□□□□ 0.44
TRIM47Q96LD4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM47Q96LD4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TRIM47Q96LD4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 AC013268.4-201ENST00000637413 2228 ntBASIC17.79■□□□□ 0.44
TRIM47Q96LD4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 PPT1-215ENST00000641471 2368 ntBASIC17.79■□□□□ 0.44
TRIM47Q96LD4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM47Q96LD4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AC022532.1-201ENST00000624563 1728 ntBASIC17.78■□□□□ 0.44
TRIM47Q96LD4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AL138799.1-201ENST00000448213 1675 ntBASIC17.78■□□□□ 0.44
TRIM47Q96LD4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.78■□□□□ 0.44
TRIM47Q96LD4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 RN7SL720P-201ENST00000488178 304 ntBASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AC245884.6-201ENST00000515672 1067 ntBASIC17.78■□□□□ 0.44
TRIM47Q96LD4 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AL023775.1-201ENST00000454907 1746 ntBASIC17.78■□□□□ 0.44
TRIM47Q96LD4 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM47Q96LD4 AP002414.2-201ENST00000591780 3365 ntBASIC17.77■□□□□ 0.44
TRIM47Q96LD4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
TRIM47Q96LD4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms