Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 AC018629.1-201ENST00000623381 1736 ntBASIC17.47■□□□□ 0.39
CDCA5Q96FF9 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 RNA5SP359-201ENST00000364838 113 ntBASIC17.47■□□□□ 0.39
CDCA5Q96FF9 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 XBP1P1-201ENST00000436573 652 ntBASIC17.47■□□□□ 0.39
CDCA5Q96FF9 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 AC026410.1-201ENST00000507366 1101 ntBASIC17.47■□□□□ 0.39
CDCA5Q96FF9 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 LINC00431-202ENST00000636375 159 ntBASIC17.47■□□□□ 0.39
CDCA5Q96FF9 AP001184.1-201ENST00000637936 376 ntBASIC17.47■□□□□ 0.39
CDCA5Q96FF9 AC012508.2-201ENST00000567613 1472 ntBASIC17.47■□□□□ 0.39
CDCA5Q96FF9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 KRT8P31-201ENST00000504812 1408 ntBASIC17.47■□□□□ 0.39
CDCA5Q96FF9 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CDCA5Q96FF9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 AL139384.1-201ENST00000612143 3047 ntBASIC17.46■□□□□ 0.39
CDCA5Q96FF9 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 IL9RP3-201ENST00000442856 1674 ntBASIC17.46■□□□□ 0.39
CDCA5Q96FF9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 AC004837.1-201ENST00000446267 564 ntBASIC17.46■□□□□ 0.39
CDCA5Q96FF9 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 ORAOV1P1-201ENST00000503108 395 ntBASIC17.46■□□□□ 0.39
CDCA5Q96FF9 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 BX088702.1-201ENST00000610784 235 ntBASIC17.46■□□□□ 0.39
CDCA5Q96FF9 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CDCA5Q96FF9 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CDCA5Q96FF9 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.46■□□□□ 0.38
CDCA5Q96FF9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
CDCA5Q96FF9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CDCA5Q96FF9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 AD000864.1-201ENST00000624076 2295 ntBASIC17.45■□□□□ 0.38
CDCA5Q96FF9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 CICP13-201ENST00000422015 2789 ntBASIC17.45■□□□□ 0.38
CDCA5Q96FF9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 TLE1P1-201ENST00000422965 589 ntBASIC17.45■□□□□ 0.38
CDCA5Q96FF9 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 AL035414.1-201ENST00000451327 857 ntBASIC17.45■□□□□ 0.38
CDCA5Q96FF9 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 AL603832.2-201ENST00000566195 2125 ntBASIC17.45■□□□□ 0.38
CDCA5Q96FF9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CDCA5Q96FF9 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms