Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC11.39□□□□□ -0.59
RNF183Q96D59 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
RNF183Q96D59 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
RNF183Q96D59 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.39□□□□□ -0.59
RNF183Q96D59 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC11.39□□□□□ -0.59
RNF183Q96D59 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.39□□□□□ -0.59
RNF183Q96D59 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RNF183Q96D59 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.39□□□□□ -0.59
RNF183Q96D59 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.39□□□□□ -0.59
RNF183Q96D59 ENPP7P5-201ENST00000541031 1031 ntBASIC11.39□□□□□ -0.59
RNF183Q96D59 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.39□□□□□ -0.59
RNF183Q96D59 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
RNF183Q96D59 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
RNF183Q96D59 AC000095.1-201ENST00000603208 874 ntBASIC11.39□□□□□ -0.59
RNF183Q96D59 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.39□□□□□ -0.59
RNF183Q96D59 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RNF183Q96D59 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.39□□□□□ -0.59
RNF183Q96D59 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.39□□□□□ -0.59
RNF183Q96D59 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.39□□□□□ -0.59
RNF183Q96D59 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RNF183Q96D59 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 AL121723.1-201ENST00000445194 1519 ntBASIC11.39□□□□□ -0.59
RNF183Q96D59 AMT-232ENST00000636199 1546 ntTSL 5 BASIC11.39□□□□□ -0.59
RNF183Q96D59 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.39□□□□□ -0.59
RNF183Q96D59 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
RNF183Q96D59 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
RNF183Q96D59 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.39□□□□□ -0.59
RNF183Q96D59 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.39□□□□□ -0.59
RNF183Q96D59 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 OR2I1P-210ENST00000642037 4691 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 AL133267.1-201ENST00000398220 340 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 SOCS2P1-201ENST00000417727 557 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.38□□□□□ -0.59
RNF183Q96D59 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 ATP5G2P4-201ENST00000442175 420 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.38□□□□□ -0.59
RNF183Q96D59 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 APOC4-201ENST00000591600 348 ntTSL 3 BASIC11.38□□□□□ -0.59
RNF183Q96D59 AC010319.3-201ENST00000597028 470 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.38□□□□□ -0.59
RNF183Q96D59 AL049840.4-201ENST00000602422 811 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.38□□□□□ -0.59
RNF183Q96D59 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 CU634019.7-201ENST00000624153 1185 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 FP236241.2-201ENST00000624906 1185 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 AC126335.2-201ENST00000623362 4637 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RNF183Q96D59 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 INTS4P2-202ENST00000614726 2019 ntBASIC11.38□□□□□ -0.59
RNF183Q96D59 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RNF183Q96D59 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RNF183Q96D59 COL6A4P2-202ENST00000504443 2753 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms