Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 AL133267.1-201ENST00000398220 340 ntBASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 AC079776.4-201ENST00000511039 504 ntBASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 IGHV3-22-201ENST00000520721 359 ntBASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 AL662844.1-201ENST00000546340 181 ntBASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 AP3S2-216ENST00000617003 1561 ntBASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CKAP2Q8WWK9 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 PDPK2P-202ENST00000562415 1191 ntBASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CKAP2Q8WWK9 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CKAP2Q8WWK9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms