Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM4Q8WVI0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM4Q8WVI0 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 AC002056.1-201ENST00000395613 760 ntBASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 RARRES2P8-201ENST00000566335 367 ntBASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 AC008267.7-201ENST00000624570 1194 ntBASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 AC025580.3-201ENST00000617932 1424 ntBASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM4Q8WVI0 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 AC027307.2-201ENST00000591252 911 ntBASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 AC093458.2-201ENST00000623150 629 ntBASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SMIM4Q8WVI0 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms