Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 AP001889.1-201ENST00000525414 633 ntBASIC16.19■□□□□ 0.18
LMO3Q8TAP4 AC068587.3-201ENST00000526613 355 ntBASIC16.19■□□□□ 0.18
LMO3Q8TAP4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 TDH-203ENST00000531764 1110 ntBASIC16.19■□□□□ 0.18
LMO3Q8TAP4 AL596325.1-201ENST00000563991 1082 ntBASIC16.19■□□□□ 0.18
LMO3Q8TAP4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.19■□□□□ 0.18
LMO3Q8TAP4 AL138725.1-201ENST00000407347 1314 ntBASIC16.19■□□□□ 0.18
LMO3Q8TAP4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 AC106760.1-201ENST00000508690 800 ntBASIC16.18■□□□□ 0.18
LMO3Q8TAP4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 PTP4A1P2-201ENST00000546033 454 ntBASIC16.18■□□□□ 0.18
LMO3Q8TAP4 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 CLUHP2-201ENST00000426660 1303 ntBASIC16.18■□□□□ 0.18
LMO3Q8TAP4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.18■□□□□ 0.18
LMO3Q8TAP4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 AL136379.1-201ENST00000623471 2642 ntBASIC16.17■□□□□ 0.18
LMO3Q8TAP4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 AC139749.1-202ENST00000617529 3139 ntBASIC16.17■□□□□ 0.18
LMO3Q8TAP4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 TLE1P1-201ENST00000422965 589 ntBASIC16.17■□□□□ 0.18
LMO3Q8TAP4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 RN7SL752P-201ENST00000463779 287 ntBASIC16.17■□□□□ 0.18
LMO3Q8TAP4 MESTP3-201ENST00000503460 968 ntBASIC16.17■□□□□ 0.18
LMO3Q8TAP4 USP32P1-208ENST00000506594 1164 ntBASIC16.17■□□□□ 0.18
LMO3Q8TAP4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 MIR3197-201ENST00000582241 73 ntBASIC16.17■□□□□ 0.18
LMO3Q8TAP4 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 AC068418.2-201ENST00000577309 3703 ntBASIC16.17■□□□□ 0.18
LMO3Q8TAP4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LMO3Q8TAP4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms