Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AL135901.1-201ENST00000451812 333 ntBASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AC144522.1-201ENST00000625111 1658 ntBASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 LINC01165-201ENST00000445190 1623 ntBASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AP002414.2-201ENST00000591780 3365 ntBASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AL359258.3-201ENST00000622910 2331 ntBASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AC005041.3-201ENST00000606287 649 ntBASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 AC011471.3-201ENST00000623576 402 ntBASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 ENPP7P8-202ENST00000527856 1345 ntBASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CCDC168Q8NDH2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AC084781.1-201ENST00000613737 656 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 LINC01783-202ENST00000614408 828 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 BX284668.2-205ENST00000619677 828 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AC233280.19-201ENST00000633223 136 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 CROCCP1-201ENST00000426910 5675 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 DBET-201ENST00000630918 3363 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AL451007.2-201ENST00000632004 563 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AP001184.1-201ENST00000637936 376 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AC004554.1-201ENST00000422830 1468 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 AC006449.5-201ENST00000610658 2098 ntBASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CCDC168Q8NDH2 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CCDC168Q8NDH2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.54□□□□□ -0.4
CCDC168Q8NDH2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CCDC168Q8NDH2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms