Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 AC067750.1-201ENST00000608826 6545 ntBASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 AC018529.2-202ENST00000611482 3087 ntBASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
LINC00346Q8IVM7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 AC104457.1-201ENST00000401024 814 ntBASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 AL512638.1-201ENST00000457493 794 ntBASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 AC004890.2-204ENST00000481968 304 ntBASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 SRD5A3P1-201ENST00000603021 949 ntBASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 BTBD7P1-201ENST00000447253 1453 ntBASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 MTHFR-210ENST00000641407 2387 ntBASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
LINC00346Q8IVM7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AC093214.1-201ENST00000511688 1107 ntBASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AL390955.2-201ENST00000603032 514 ntBASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AC004790.1-201ENST00000612686 536 ntBASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00346Q8IVM7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms