Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 KRT8P12-202ENST00000472924 1397 ntBASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
NUDCD3Q8IVD9 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 AC074338.1-201ENST00000416825 156 ntBASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 ACTG1P14-201ENST00000446382 1122 ntBASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 ALG1L8P-201ENST00000533887 760 ntBASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
NUDCD3Q8IVD9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 YBX2P1-201ENST00000394192 760 ntBASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.16■□□□□ 0.02
NUDCD3Q8IVD9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms