Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AL603832.2-201ENST00000566195 2125 ntBASIC10.31□□□□□ -0.76
CSMD3Q7Z407 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AC106047.2-201ENST00000511723 743 ntBASIC10.31□□□□□ -0.76
CSMD3Q7Z407 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AC068867.1-201ENST00000559855 150 ntBASIC10.31□□□□□ -0.76
CSMD3Q7Z407 MBP-238ENST00000580402 915 ntTSL 5 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AC233280.19-201ENST00000633223 136 ntBASIC10.31□□□□□ -0.76
CSMD3Q7Z407 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 MIR566-201ENST00000385187 94 ntBASIC10.31□□□□□ -0.76
CSMD3Q7Z407 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 GCSHP3-201ENST00000431120 391 ntBASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 MT3-203ENST00000565838 421 ntTSL 3 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AC008825.2-201ENST00000603374 718 ntBASIC10.31□□□□□ -0.76
CSMD3Q7Z407 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 MRPL37P1-201ENST00000592451 1337 ntBASIC10.31□□□□□ -0.76
CSMD3Q7Z407 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CSMD3Q7Z407 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 WARS-232ENST00000556645 2508 ntTSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 XBP1P1-201ENST00000436573 652 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AC140113.1-201ENST00000603467 169 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 LINC00528-201ENST00000600723 2160 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 DUTP3-201ENST00000450025 415 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AC026470.1-201ENST00000478038 846 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 CD164-210ENST00000512821 964 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AC090510.3-201ENST00000615831 821 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 FRMPD2B-201ENST00000431305 1347 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
CSMD3Q7Z407 AL357373.1-201ENST00000394974 322 ntBASIC10.3□□□□□ -0.76
CSMD3Q7Z407 HLA-DMA-203ENST00000395305 777 ntBASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 157.4 ms