Protein–RNA interactions for Protein: Q6V1P9

DCHS2, Protocadherin-23, humanhuman

Predictions only

Length 2,916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS2Q6V1P9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 LINC01783-202ENST00000614408 828 ntBASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 BX284668.2-205ENST00000619677 828 ntBASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 LINC00431-202ENST00000636375 159 ntBASIC12.72□□□□□ -0.37
DCHS2Q6V1P9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 AC018629.1-201ENST00000623381 1736 ntBASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 HLA-DQB1-202ENST00000399079 1501 ntBASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 PSMD4P1-201ENST00000433951 1109 ntBASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 AC092638.2-201ENST00000441105 947 ntBASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
DCHS2Q6V1P9 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 AL109809.1-201ENST00000418979 1367 ntBASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 CYP2T1P-202ENST00000641596 2535 ntBASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 COX20P1-201ENST00000366529 357 ntBASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 PUDPP3-201ENST00000445368 636 ntBASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 AC012073.1-201ENST00000606114 1108 ntBASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 MME-218ENST00000625667 363 ntTSL 5 BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 AL360270.3-201ENST00000609118 1348 ntBASIC12.71□□□□□ -0.38
DCHS2Q6V1P9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 LINC00634-202ENST00000505157 222 ntBASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 AC012158.2-201ENST00000536546 354 ntBASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
DCHS2Q6V1P9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms