Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CNKSR3Q6P9H4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 AL645933.1-201ENST00000440087 609 ntBASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 AC079112.1-201ENST00000454972 939 ntBASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 LINC01783-202ENST00000614408 828 ntBASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 BX284668.2-205ENST00000619677 828 ntBASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 AC133540.1-201ENST00000620845 1019 ntBASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 LILRP1-201ENST00000444199 1370 ntBASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CNKSR3Q6P9H4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AL139384.1-201ENST00000612143 3047 ntBASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AC130709.1-201ENST00000484779 1212 ntBASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CNKSR3Q6P9H4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CNKSR3Q6P9H4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.09■□□□□ 0.17
CNKSR3Q6P9H4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNKSR3Q6P9H4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNKSR3Q6P9H4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNKSR3Q6P9H4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CNKSR3Q6P9H4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CNKSR3Q6P9H4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms