Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 AC026434.2-201ENST00000506094 1078 ntBASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 AC022616.1-201ENST00000518688 554 ntBASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 RPSAP52-203ENST00000622976 1023 ntBASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CREB3L3Q68CJ9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 ACKR1-201ENST00000368121 1240 ntBASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 AL162726.2-201ENST00000438986 1017 ntBASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 AC093433.1-201ENST00000458048 571 ntBASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 AP001063.1-201ENST00000568332 529 ntBASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 AL033527.5-201ENST00000641382 801 ntBASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 AC055811.4-201ENST00000624039 1754 ntBASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 AC018665.1-201ENST00000622927 1362 ntBASIC18.04■□□□□ 0.48
CREB3L3Q68CJ9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 AC007191.1-201ENST00000623179 2995 ntBASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 MSTO2P-201ENST00000314835 1709 ntBASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CREB3L3Q68CJ9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CREB3L3Q68CJ9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.02■□□□□ 0.48
CREB3L3Q68CJ9 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CREB3L3Q68CJ9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CREB3L3Q68CJ9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CREB3L3Q68CJ9 AC067930.6-201ENST00000623257 4947 ntBASIC18.02■□□□□ 0.48
CREB3L3Q68CJ9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CREB3L3Q68CJ9 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CREB3L3Q68CJ9 AL009178.2-201ENST00000597278 2719 ntBASIC18.02■□□□□ 0.48
CREB3L3Q68CJ9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms