Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 MIR5196-201ENST00000578146 115 ntBASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 AC007326.1-201ENST00000604539 458 ntBASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 AC127024.7-201ENST00000625101 200 ntBASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 NUDT4P2-201ENST00000578341 546 ntBASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 CELP-203ENST00000624767 2414 ntTSL 5 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC22.31■■□□□ 1.16
CDC42BPAQ5VT25 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 LINC01815-202ENST00000641468 1409 ntBASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 LYPLA2P1-203ENST00000447689 696 ntBASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 AC009560.1-201ENST00000620208 434 ntBASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 HLA-DQB1-202ENST00000399079 1501 ntBASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC22.3■■□□□ 1.16
CDC42BPAQ5VT25 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 ACE3P-201ENST00000423435 1973 ntBASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42BPAQ5VT25 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AC124068.2-201ENST00000569473 1109 ntBASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AC087392.5-201ENST00000612517 489 ntBASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 AL132780.4-201ENST00000624870 1135 ntBASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC22.28■■□□□ 1.16
CDC42BPAQ5VT25 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms