Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RC3H1Q5TC82 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 AHCYP4-201ENST00000419201 1315 ntBASIC18.77■□□□□ 0.6
RC3H1Q5TC82 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 AC007292.2-201ENST00000593524 1812 ntBASIC18.77■□□□□ 0.6
RC3H1Q5TC82 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 LYPLA2P1-203ENST00000447689 696 ntBASIC18.77■□□□□ 0.6
RC3H1Q5TC82 FTH1P22-201ENST00000456305 520 ntBASIC18.77■□□□□ 0.6
RC3H1Q5TC82 AC018463.1-201ENST00000456674 917 ntBASIC18.77■□□□□ 0.6
RC3H1Q5TC82 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 RN7SL81P-201ENST00000493781 261 ntBASIC18.77■□□□□ 0.6
RC3H1Q5TC82 TMCO5B-205ENST00000530020 894 ntBASIC18.77■□□□□ 0.6
RC3H1Q5TC82 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 AC087392.5-201ENST00000612517 489 ntBASIC18.77■□□□□ 0.6
RC3H1Q5TC82 AL132780.4-201ENST00000624870 1135 ntBASIC18.77■□□□□ 0.6
RC3H1Q5TC82 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 MVK-217ENST00000639206 367 ntTSL 5 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC18.77■□□□□ 0.6
RC3H1Q5TC82 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RC3H1Q5TC82 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 AC003686.1-201ENST00000550956 1034 ntBASIC18.76■□□□□ 0.59
RC3H1Q5TC82 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 AC084781.1-201ENST00000613737 656 ntBASIC18.76■□□□□ 0.59
RC3H1Q5TC82 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RC3H1Q5TC82 AP000845.1-201ENST00000581677 2131 ntBASIC18.76■□□□□ 0.59
RC3H1Q5TC82 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.75■□□□□ 0.59
RC3H1Q5TC82 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RC3H1Q5TC82 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms