Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC011474.4-201ENST00000623523 2076 ntBASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC00242Q5T6M2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 MST1P2-201ENST00000457982 2291 ntBASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 MED15P5-201ENST00000423150 992 ntBASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 ACTG1P14-201ENST00000446382 1122 ntBASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AC009078.2-202ENST00000463353 338 ntBASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AC027601.4-201ENST00000611259 610 ntBASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
LINC00242Q5T6M2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 IL9RP2-201ENST00000423948 1312 ntBASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 AC140113.2-201ENST00000604370 208 ntBASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 AL133215.2-201ENST00000609242 977 ntBASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 FAM197Y3-203ENST00000618346 717 ntBASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
LINC00242Q5T6M2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms