Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 MIR663B-201ENST00000408361 115 ntBASIC16.09■□□□□ 0.17
VARS2Q5ST30 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.09■□□□□ 0.17
VARS2Q5ST30 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 AC121493.1-201ENST00000602316 450 ntBASIC16.09■□□□□ 0.17
VARS2Q5ST30 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 AC244157.2-201ENST00000616239 1006 ntBASIC16.09■□□□□ 0.17
VARS2Q5ST30 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 AC103702.1-201ENST00000548801 2630 ntBASIC16.09■□□□□ 0.17
VARS2Q5ST30 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VARS2Q5ST30 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.09■□□□□ 0.17
VARS2Q5ST30 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VARS2Q5ST30 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.08■□□□□ 0.17
VARS2Q5ST30 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
VARS2Q5ST30 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
VARS2Q5ST30 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
VARS2Q5ST30 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
VARS2Q5ST30 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.08■□□□□ 0.17
VARS2Q5ST30 AL513477.1-201ENST00000602865 2407 ntBASIC16.08■□□□□ 0.17
VARS2Q5ST30 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
VARS2Q5ST30 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
VARS2Q5ST30 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.08■□□□□ 0.17
VARS2Q5ST30 HYMAI-201ENST00000635591 3347 ntBASIC16.08■□□□□ 0.17
VARS2Q5ST30 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
VARS2Q5ST30 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
VARS2Q5ST30 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 AC004777.1-201ENST00000624317 287 ntBASIC16.08■□□□□ 0.16
VARS2Q5ST30 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
VARS2Q5ST30 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
VARS2Q5ST30 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms