Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 AC093433.1-201ENST00000458048 571 ntBASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 AC026434.2-201ENST00000506094 1078 ntBASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 AP001063.1-201ENST00000568332 529 ntBASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CBWD3Q5JTY5 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CBWD3Q5JTY5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 AC005912.2-201ENST00000619492 2400 ntBASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 AC055811.4-201ENST00000624039 1754 ntBASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CBWD3Q5JTY5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 ACKR1-201ENST00000368121 1240 ntBASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CBWD3Q5JTY5 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms