Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AC134915.1-201ENST00000426461 574 ntBASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC4Q5GLZ8 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 AC007787.1-201ENST00000588095 1583 ntBASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 AC023824.1-201ENST00000562945 2975 ntBASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 TUBB1P2-201ENST00000422712 1306 ntBASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 TUBB1P1-201ENST00000503144 1300 ntBASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 INTS4P2-202ENST00000614726 2019 ntBASIC17.02■□□□□ 0.32
HERC4Q5GLZ8 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 AC126755.1-201ENST00000525846 6405 ntBASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC4Q5GLZ8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC4Q5GLZ8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms