Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PTPN20Q4JDL3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PTPN20Q4JDL3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 AL035633.1-201ENST00000406139 838 ntBASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 AC012441.1-201ENST00000446669 685 ntBASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 INE1-201ENST00000456273 945 ntBASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 GIMAP3P-201ENST00000495150 836 ntBASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 KRT18P25-201ENST00000508931 1278 ntBASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 AC068587.3-201ENST00000526613 355 ntBASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 TDH-203ENST00000531764 1110 ntBASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 AC007686.3-201ENST00000619017 3487 ntBASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PTPN20Q4JDL3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 LRRC59-203ENST00000576448 1531 ntBASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 BAATP1-201ENST00000412284 1225 ntBASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 LINC00552-201ENST00000625151 2579 ntBASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 AC068587.6-202ENST00000641839 5619 ntBASIC15.96■□□□□ 0.15
PTPN20Q4JDL3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN20Q4JDL3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN20Q4JDL3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN20Q4JDL3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.96■□□□□ 0.14
PTPN20Q4JDL3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PTPN20Q4JDL3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms